Variants with conflicting interpretations, by significance

Y axis minimum submission review status:		Y axis collection method:
X axis minimum submission review status:		X axis collection method:
Minimum conflict level: Report conflict between different conditions
Show significances as they were submitted (without aggregation into standard terms)

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition	Variants with at least 2 submissions on the same condition and no conflicts	Variants with a synonymous conflict (e.g. benign vs non-pathogenic)	Variants with a confidence conflict (e.g. benign vs likely benign)	Variants with a benign or likely benign vs uncertain conflict	Variants with a category conflict (e.g. benign vs affects)	Variants with a clinically significant conflict (e.g. benign vs pathogenic)	Variants with any conflict
3953409	382558	256	99151	79236	810	19632	183195

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

	pathogenic	likely pathogenic	uncertain significance	likely benign	benign	affects	association	association not found	drug response	protective	other
pathogenic	183	33610	8607	662	530	56	19	3	93	5	140
likely pathogenic	33610	33	13571	683	347	30	11	1	48	4	78
uncertain significance	8607	13571	44	71260	16532	33	24	0	59	7	195
likely benign	662	683	71260	1	65605	11	20	0	61	10	121
benign	530	347	16532	65605	0	27	42	0	79	20	63
affects	56	30	33	11	27	0	3	0	0	0	1
association	19	11	24	20	42	3	1	0	4	1	4
association not found	3	1	0	0	0	0	0	0	0	0	0
drug response	93	48	59	61	79	0	4	0	0	0	23
protective	5	4	7	10	20	0	1	0	0	0	1
other	140	78	195	121	63	1	4	0	23	1	0

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