ClinVar Miner

Variants in gene OBSCN with conflicting interpretations

See also:
Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
5365 351 0 134 53 0 5 188

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 1 3 0 0
likely pathogenic 1 0 2 0 0
uncertain significance 3 2 0 53 3
likely benign 0 0 53 0 133
benign 0 0 3 133 0

All variants with conflicting interpretations #

Total variants: 188
Download table as spreadsheet
HGVS dbSNP gnomAD frequency
NM_001386125.1(OBSCN):c.2894G>A (p.Arg965Lys) rs61560753 0.02514
NM_001386125.1(OBSCN):c.144G>A (p.Gln48=) rs114375717 0.01168
NM_001386125.1(OBSCN):c.8610C>G (p.Thr2870=) rs185248802 0.00920
NM_001386125.1(OBSCN):c.9803C>T (p.Ala3268Val) rs113447751 0.00871
NM_001386125.1(OBSCN):c.11984C>T (p.Pro3995Leu) rs62621834 0.00810
NM_001386125.1(OBSCN):c.21533-2508C>T rs151322036 0.00797
NM_001386125.1(OBSCN):c.19980T>A (p.Ser6660Arg) rs144372515 0.00796
NM_001386125.1(OBSCN):c.21533-2165C>T rs145544878 0.00776
NM_001386125.1(OBSCN):c.11521G>A (p.Gly3841Arg) rs56271332 0.00765
NM_001386125.1(OBSCN):c.16699C>T (p.Leu5567=) rs116642293 0.00761
NM_001386125.1(OBSCN):c.21533-1980G>A rs114053815 0.00757
NM_001386125.1(OBSCN):c.23344T>G (p.Phe7782Val) rs113876855 0.00741
NM_001386125.1(OBSCN):c.16233G>A (p.Thr5411=) rs372827129 0.00726
NM_001386125.1(OBSCN):c.3141G>A (p.Ala1047=) rs140550965 0.00725
NM_001386125.1(OBSCN):c.2528G>A (p.Arg843His) rs141921462 0.00724
NM_001386125.1(OBSCN):c.10472T>G (p.Val3491Gly) rs202022683 0.00722
NM_001386125.1(OBSCN):c.21533-1833G>A rs114510676 0.00711
NM_001386125.1(OBSCN):c.21533-2586C>T rs367920745 0.00675
NM_001386125.1(OBSCN):c.6447C>T (p.His2149=) rs138055037 0.00672
NM_001386125.1(OBSCN):c.6253C>T (p.His2085Tyr) rs189809636 0.00654
NM_001386125.1(OBSCN):c.7615C>G (p.Leu2539Val) rs201269256 0.00628
NM_001386125.1(OBSCN):c.4017T>C (p.Phe1339=) rs75365769 0.00605
NM_001386125.1(OBSCN):c.4020A>C (p.Gln1340His) rs199523598 0.00605
NM_001386125.1(OBSCN):c.15666G>A (p.Gln5222=) rs111731636 0.00602
NM_001386125.1(OBSCN):c.2279G>A (p.Arg760Gln) rs180689095 0.00597
NM_001386125.1(OBSCN):c.6403C>T (p.Arg2135Cys) rs114195142 0.00596
NM_001386125.1(OBSCN):c.18698G>A (p.Arg6233His) rs56015866 0.00583
NM_001386125.1(OBSCN):c.11559G>A (p.Val3853=) rs111402242 0.00529
NM_001386125.1(OBSCN):c.8633T>C (p.Val2878Ala) rs200720682 0.00517
NM_001386125.1(OBSCN):c.20169C>T (p.Asp6723=) rs142093978 0.00513
NM_001386125.1(OBSCN):c.5262C>T (p.Asp1754=) rs142188902 0.00434
NM_001386125.1(OBSCN):c.2052C>T (p.Phe684=) rs112046759 0.00430
NM_001386125.1(OBSCN):c.1176C>T (p.Arg392=) rs185717159 0.00405
NM_001386125.1(OBSCN):c.8625C>T (p.Thr2875=) rs12030528 0.00399
NM_001386125.1(OBSCN):c.10722T>C (p.His3574=) rs75962730 0.00393
NM_001386125.1(OBSCN):c.23385_23386del (p.Ala7795_Ser7796insTer) rs536227878 0.00385
NM_001386125.1(OBSCN):c.8913G>A (p.Ala2971=) rs114985895 0.00382
NM_001386125.1(OBSCN):c.20528A>G (p.Tyr6843Cys) rs200385051 0.00366
NM_001386125.1(OBSCN):c.25748C>T (p.Thr8583Met) rs184394044 0.00364
NM_001386125.1(OBSCN):c.6407G>A (p.Arg2136His) rs28603121 0.00349
NM_001386125.1(OBSCN):c.21533-2450G>C rs141801603 0.00348
NM_001386125.1(OBSCN):c.18465C>T (p.Arg6155=) rs114969585 0.00342
NM_001386125.1(OBSCN):c.12634T>C (p.Ser4212Pro) rs147471011 0.00341
NM_001386125.1(OBSCN):c.9424G>A (p.Ala3142Thr) rs191370080 0.00326
NM_001386125.1(OBSCN):c.35T>A (p.Phe12Tyr) rs191837710 0.00319
NM_001386125.1(OBSCN):c.21533-1917G>A rs141233508 0.00317
NM_001386125.1(OBSCN):c.11291C>T (p.Ala3764Val) rs55946300 0.00308
NM_001386125.1(OBSCN):c.16397G>A (p.Arg5466His) rs193004966 0.00307
NM_001386125.1(OBSCN):c.21533-2364G>A rs117551232 0.00302
NM_001386125.1(OBSCN):c.8617A>T (p.Thr2873Ser) rs180753915 0.00299
NM_001386125.1(OBSCN):c.12234G>A (p.Leu4078=) rs140221070 0.00296
NM_001386125.1(OBSCN):c.9336C>T (p.Gly3112=) rs369705683 0.00294
NM_001386125.1(OBSCN):c.11538G>T (p.Leu3846=) rs114473169 0.00293
NM_001386125.1(OBSCN):c.4490G>A (p.Arg1497Gln) rs199874295 0.00291
NM_001386125.1(OBSCN):c.3162C>T (p.Cys1054=) rs12040506 0.00289
NM_001386125.1(OBSCN):c.17179C>T (p.Arg5727Cys) rs186194072 0.00286
NM_001386125.1(OBSCN):c.16333C>G (p.His5445Asp) rs188287808 0.00271
NM_001386125.1(OBSCN):c.23056G>A (p.Glu7686Lys) rs73099650 0.00251
NM_001386125.1(OBSCN):c.11031G>A (p.Pro3677=) rs79290523 0.00250
NM_001386125.1(OBSCN):c.25956G>A (p.Gly8652=) rs56293188 0.00232
NM_001386125.1(OBSCN):c.22155C>G (p.Thr7385=) rs145531536 0.00229
NM_001386125.1(OBSCN):c.5565A>C (p.Lys1855Asn) rs199646052 0.00220
NM_001386125.1(OBSCN):c.2342G>A (p.Arg781His) rs144514297 0.00208
NM_001386125.1(OBSCN):c.11457C>T (p.Pro3819=) rs56367754 0.00198
NM_001386125.1(OBSCN):c.9957C>T (p.Leu3319=) rs114058903 0.00198
NM_001386125.1(OBSCN):c.9819G>A (p.Val3273=) rs112403932 0.00184
NM_001386125.1(OBSCN):c.1692C>T (p.His564=) rs141857686 0.00183
NM_001386125.1(OBSCN):c.19394G>T (p.Gly6465Val) rs199638902 0.00174
NM_001386125.1(OBSCN):c.21214C>G (p.Arg7072Gly) rs142615706 0.00172
NM_001386125.1(OBSCN):c.2328C>T (p.Tyr776=) rs369447003 0.00172
NM_001386125.1(OBSCN):c.23281G>C (p.Ala7761Pro) rs202236799 0.00161
NM_001386125.1(OBSCN):c.9842G>A (p.Arg3281Gln) rs188024384 0.00154
NM_001386125.1(OBSCN):c.23303C>A (p.Pro7768His) rs201092597 0.00149
NM_001386125.1(OBSCN):c.17438G>A (p.Arg5813His) rs200599475 0.00147
NM_001386125.1(OBSCN):c.21532+3123C>T rs146933748 0.00140
NM_001386125.1(OBSCN):c.8343C>T (p.His2781=) rs376684253 0.00138
NM_001386125.1(OBSCN):c.509G>C (p.Arg170Pro) rs762532673 0.00136
NM_001386125.1(OBSCN):c.15509G>A (p.Arg5170His) rs56306215 0.00135
NM_001386125.1(OBSCN):c.11061C>T (p.Phe3687=) rs369584483 0.00134
NM_001386125.1(OBSCN):c.18010G>T (p.Asp6004Tyr) rs41305122 0.00131
NM_001386125.1(OBSCN):c.11853C>T (p.Cys3951=) rs200826459 0.00125
NM_001386125.1(OBSCN):c.20115C>T (p.Gly6705=) rs140147625 0.00117
NM_001386125.1(OBSCN):c.4393G>A (p.Glu1465Lys) rs201854668 0.00116
NM_001386125.1(OBSCN):c.17759G>A (p.Arg5920His) rs186895476 0.00115
NM_001386125.1(OBSCN):c.3288C>T (p.Cys1096=) rs373806868 0.00114
NM_001386125.1(OBSCN):c.6296G>A (p.Arg2099His) rs200483572 0.00109
NM_001386125.1(OBSCN):c.24417C>T (p.Arg8139=) rs499309 0.00105
NM_001386125.1(OBSCN):c.16425C>T (p.Thr5475=) rs373494343 0.00102
NM_001386125.1(OBSCN):c.20502G>A (p.Lys6834=) rs191140144 0.00102
NM_001386125.1(OBSCN):c.7302C>T (p.Cys2434=) rs369558704 0.00098
NM_001386125.1(OBSCN):c.1899C>T (p.Ser633=) rs193175485 0.00094
NM_001386125.1(OBSCN):c.18062C>T (p.Ala6021Val) rs56359770 0.00093
NM_001386125.1(OBSCN):c.21303C>T (p.Asp7101=) rs56187628 0.00092
NM_001386125.1(OBSCN):c.16002C>T (p.Asp5334=) rs189811758 0.00090
NM_001386125.1(OBSCN):c.13564G>A (p.Ala4522Thr) rs55939441 0.00086
NM_001386125.1(OBSCN):c.18705C>A (p.Ala6235=) rs56025664 0.00086
NM_001386125.1(OBSCN):c.19208C>T (p.Thr6403Ile) rs113760892 0.00086
NM_001386125.1(OBSCN):c.17174C>T (p.Ser5725Leu) rs181568906 0.00083
NM_001386125.1(OBSCN):c.16015A>G (p.Thr5339Ala) rs183406337 0.00078
NM_001386125.1(OBSCN):c.16853A>C (p.Glu5618Ala) rs200399314 0.00076
NM_001386125.1(OBSCN):c.2375A>G (p.Gln792Arg) rs199704824 0.00075
NM_001386125.1(OBSCN):c.9672G>A (p.Val3224=) rs3795784 0.00074
NM_001386125.1(OBSCN):c.8668C>T (p.Arg2890Cys) rs199985706 0.00072
NM_001386125.1(OBSCN):c.9065A>G (p.Asn3022Ser) rs113202278 0.00072
NM_001386125.1(OBSCN):c.16251C>T (p.Pro5417=) rs117435683 0.00056
NM_001386125.1(OBSCN):c.16361A>T (p.Gln5454Leu) rs116329268 0.00047
NM_001386125.1(OBSCN):c.17917C>T (p.Arg5973Trp) rs201097669 0.00046
NM_001386125.1(OBSCN):c.24984A>G (p.Ser8328=) rs370699889 0.00046
NM_001386125.1(OBSCN):c.16339G>A (p.Ala5447Thr) rs374685729 0.00045
NM_001386125.1(OBSCN):c.8997G>A (p.Thr2999=) rs371979789 0.00043
NM_001386125.1(OBSCN):c.20378T>C (p.Val6793Ala) rs200917956 0.00038
NM_001386125.1(OBSCN):c.21533-2783C>G rs139819384 0.00037
NM_001386125.1(OBSCN):c.8804C>T (p.Thr2935Met) rs139306713 0.00034
NM_001386125.1(OBSCN):c.10115C>T (p.Ala3372Val) rs199933567 0.00033
NM_001386125.1(OBSCN):c.15282C>T (p.Gly5094=) rs372059649 0.00033
NM_001386125.1(OBSCN):c.3278C>T (p.Thr1093Met) rs185531813 0.00033
NM_001386125.1(OBSCN):c.15217G>A (p.Glu5073Lys) rs201877667 0.00032
NM_001386125.1(OBSCN):c.19850C>T (p.Ala6617Val) rs191098985 0.00032
NM_001386125.1(OBSCN):c.2444C>T (p.Ala815Val) rs367550916 0.00032
NM_001386125.1(OBSCN):c.23350C>T (p.Arg7784Trp) rs369885852 0.00031
NM_001386125.1(OBSCN):c.1925G>T (p.Gly642Val) rs565010929 0.00030
NM_001386125.1(OBSCN):c.21533-2163C>T rs528921605 0.00030
NM_001386125.1(OBSCN):c.12420C>T (p.Ala4140=) rs199641194 0.00026
NM_001386125.1(OBSCN):c.19271C>T (p.Ser6424Leu) rs376301901 0.00025
NM_001386125.1(OBSCN):c.21191C>T (p.Pro7064Leu) rs377350131 0.00022
NM_001386125.1(OBSCN):c.20021G>A (p.Ser6674Asn) rs376194851 0.00021
NM_001386125.1(OBSCN):c.7046G>A (p.Gly2349Asp) rs529006106 0.00021
NM_001386125.1(OBSCN):c.22303G>A (p.Val7435Met) rs551375918 0.00019
NM_001386125.1(OBSCN):c.3099A>G (p.Thr1033=) rs202097101 0.00018
NM_001386125.1(OBSCN):c.16277A>G (p.Asn5426Ser) rs375723852 0.00017
NM_001386125.1(OBSCN):c.24415C>T (p.Arg8139Cys) rs202143056 0.00017
NM_001386125.1(OBSCN):c.16503A>G (p.Ala5501=) rs370547153 0.00016
NM_001386125.1(OBSCN):c.17696G>A (p.Arg5899Gln) rs367752269 0.00016
NM_001386125.1(OBSCN):c.3185C>T (p.Ser1062Phe) rs200058427 0.00015
NM_001386125.1(OBSCN):c.2614G>A (p.Val872Met) rs753928558 0.00014
NM_001386125.1(OBSCN):c.17926C>T (p.Arg5976Cys) rs772551661 0.00013
NM_001386125.1(OBSCN):c.2653+1G>C rs531253434 0.00013
NM_001386125.1(OBSCN):c.12345C>T (p.Leu4115=) rs527943941 0.00012
NM_001386125.1(OBSCN):c.14809C>T (p.Arg4937Trp) rs750723281 0.00011
NM_001386125.1(OBSCN):c.1447T>C (p.Cys483Arg) rs769496430 0.00010
NM_001386125.1(OBSCN):c.6391G>T (p.Gly2131Cys) rs529561467 0.00010
NM_001386125.1(OBSCN):c.23102G>A (p.Arg7701Gln) rs749702058 0.00009
NM_001386125.1(OBSCN):c.5599C>G (p.Leu1867Val) rs563377499 0.00009
NM_001386125.1(OBSCN):c.19661C>G (p.Ala6554Gly) rs770355592 0.00008
NM_001386125.1(OBSCN):c.9974A>G (p.Tyr3325Cys) rs368739297 0.00008
NM_001386125.1(OBSCN):c.11282G>A (p.Arg3761His) rs368175234 0.00007
NM_001386125.1(OBSCN):c.18456C>T (p.Gly6152=) rs183960364 0.00007
NM_001386125.1(OBSCN):c.19991C>A (p.Ala6664Asp) rs758211855 0.00007
NM_001386125.1(OBSCN):c.26254G>A (p.Glu8752Lys) rs780502525 0.00007
NM_001386125.1(OBSCN):c.2639G>A (p.Arg880Gln) rs562324692 0.00007
NM_001386125.1(OBSCN):c.15359G>A (p.Arg5120Gln) rs548710709 0.00006
NM_001386125.1(OBSCN):c.15633G>A (p.Glu5211=) rs529583811 0.00006
NM_001386125.1(OBSCN):c.14555C>T (p.Pro4852Leu) rs201366506 0.00004
NM_001386125.1(OBSCN):c.4797G>A (p.Ala1599=) rs372472787 0.00004
NM_001386125.1(OBSCN):c.9499A>G (p.Ile3167Val) rs764679750 0.00004
NM_001386125.1(OBSCN):c.10279C>A (p.Leu3427Ile) rs761994990 0.00003
NM_001386125.1(OBSCN):c.21713C>A (p.Ala7238Asp) rs547447722 0.00003
NM_001386125.1(OBSCN):c.962A>G (p.Tyr321Cys) rs771719843 0.00003
NM_001386125.1(OBSCN):c.18006C>T (p.Pro6002=) rs534386095 0.00002
NM_001386125.1(OBSCN):c.3040A>T (p.Thr1014Ser) rs779774732 0.00002
NM_001386125.1(OBSCN):c.8414A>G (p.Glu2805Gly) rs947434915 0.00002
NM_001386125.1(OBSCN):c.11034G>C (p.Gln3678His) rs1284658608 0.00001
NM_001386125.1(OBSCN):c.21532+3106A>G rs755253225 0.00001
NM_001386125.1(OBSCN):c.24718C>T (p.Arg8240Trp) rs759680619 0.00001
NM_001386125.1(OBSCN):c.8582C>T (p.Thr2861Met) rs747262678 0.00001
NM_001386125.1(OBSCN):c.8631C>T (p.Pro2877=) rs781325246 0.00001
NM_001386125.1(OBSCN):c.9172G>A (p.Ala3058Thr) rs1433965473 0.00001
NM_001386125.1(OBSCN):c.10616del (p.Gly3539fs) rs1206678898
NM_001386125.1(OBSCN):c.11041G>A (p.Gly3681Arg) rs200870329
NM_001386125.1(OBSCN):c.1199C>T (p.Ala400Val) rs201231167
NM_001386125.1(OBSCN):c.12783G>C (p.Glu4261Asp) rs375459972
NM_001386125.1(OBSCN):c.15261A>T (p.Gln5087His) rs569260441
NM_001386125.1(OBSCN):c.16019C>T (p.Ser5340Leu)
NM_001386125.1(OBSCN):c.18190C>T (p.Pro6064Ser)
NM_001386125.1(OBSCN):c.19060C>T (p.Arg6354Cys) rs773797780
NM_001386125.1(OBSCN):c.20055C>A (p.His6685Gln) rs200092155
NM_001386125.1(OBSCN):c.21282G>T (p.Pro7094=) rs372931114
NM_001386125.1(OBSCN):c.21533-2727G>A rs371440359
NM_001386125.1(OBSCN):c.23838del (p.Ser7947fs) rs71180793
NM_001386125.1(OBSCN):c.25255+1G>A
NM_001386125.1(OBSCN):c.3284G>C (p.Ser1095Thr) rs201224400
NM_001386125.1(OBSCN):c.4225dup (p.Val1409fs) rs759751670
NM_001386125.1(OBSCN):c.496G>A (p.Ala166Thr) rs555146765
NM_001386125.1(OBSCN):c.6599C>T (p.Thr2200Met)
NM_001386125.1(OBSCN):c.7620C>G (p.Pro2540=) rs370612657
NM_001386125.1(OBSCN):c.7633C>T (p.Arg2545Cys) rs376500523
NM_001386125.1(OBSCN):c.7695G>A (p.Ser2565=) rs374013818
NM_001386125.1(OBSCN):c.8103T>G (p.Phe2701Leu) rs200804771

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