Variants in gene NPAT - ClinVar Miner

Minimum submission review status:		Collection method:
Minimum conflict level: Report conflict between different conditions
Gene type: Distinguish antisense genes from sense genes
Show significances as they were submitted (without aggregation into standard terms)

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic	likely pathogenic	uncertain significance	likely benign	benign	not provided	total
0	0	1556	795	32	22	2351

Condition and significance breakdown #

Total conditions: 15

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Condition	uncertain significance	likely benign	benign	not provided	total
not specified	1385	716	10	0	2101
not provided	374	175	31	0	575
Thyroid cancer, nonmedullary, 1	0	0	0	6	6
Gastric cancer	0	0	0	3	3
Ovarian serous cystadenocarcinoma	0	0	0	3	3
Acute myeloid leukemia	0	0	0	2	2
Familial cancer of breast	0	0	0	2	2
Melanoma	0	0	0	2	2
NPAT-related disorder	0	2	0	0	2
Uterine corpus endometrial carcinoma	0	0	0	2	2
Familial colorectal cancer type X	1	0	0	0	1
Malignant tumor of urinary bladder	0	0	0	1	1
Nonpapillary renal cell carcinoma	0	0	0	1	1
Pancreatic adenocarcinoma	0	0	0	1	1
Thymoma	0	0	0	1	1

Submitter and significance breakdown #

Total submitters: 9

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Submitter	uncertain significance	likely benign	benign	not provided	total
Ambry Genetics	1367	712	0	0	2079
Labcorp Genetics (formerly Invitae), Labcorp	372	171	30	0	573
Genetic Services Laboratory, University of Chicago	29	9	10	0	48
Dr. Peter K. Rogan Lab, Western University	0	0	0	22	22
Breakthrough Genomics, Breakthrough Genomics	2	4	2	0	8
CeGaT Center for Human Genetics Tuebingen	0	3	1	0	4
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories	2	0	0	0	2
PreventionGenetics, part of Exact Sciences	0	2	0	0	2
Institute for Genomic Medicine (IGM) Clinical Laboratory, Nationwide Children's Hospital	1	0	0	0	1

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