ClinVar Miner

Variants in gene ALPK2

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Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic likely pathogenic uncertain significance likely benign benign not provided total
0 0 1347 751 49 29 2157

Condition and significance breakdown #

Total conditions: 17
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Condition uncertain significance likely benign benign not provided total
not specified 1347 743 1 0 2091
ALPK2-related disorder 0 16 48 0 64
Ovarian serous cystadenocarcinoma 0 0 0 12 12
not provided 1 2 3 0 6
Nonpapillary renal cell carcinoma 0 0 0 4 4
Lung cancer 0 0 0 3 3
Malignant lymphoma, large B-cell, diffuse 0 0 0 3 3
Cholangiocarcinoma 0 0 0 2 2
Gastric cancer 0 0 0 2 2
Hepatocellular carcinoma 0 0 0 2 2
Melanoma 0 0 0 2 2
Thymoma 0 0 0 2 2
Thyroid cancer, nonmedullary, 1 0 0 0 2 2
Uterine corpus endometrial carcinoma 0 0 0 2 2
Clear cell carcinoma of kidney 0 0 0 1 1
Malignant tumor of esophagus 0 0 0 1 1
Uterine carcinosarcoma 0 0 0 1 1

Submitter and significance breakdown #

Total submitters: 6
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Submitter uncertain significance likely benign benign not provided total
Ambry Genetics 1347 743 1 0 2091
PreventionGenetics, part of Exact Sciences 0 16 48 0 64
Dr. Peter K. Rogan Lab, Western University 0 0 0 29 29
Breakthrough Genomics, Breakthrough Genomics 1 1 2 0 4
Labcorp Genetics (formerly Invitae), Labcorp 0 0 3 0 3
CeGaT Center for Human Genetics Tuebingen 0 1 0 0 1

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