ClinVar Miner

Submissions for variant NM_022836.4(DCLRE1B):c.1188C>G (p.Ile396Met)

gnomAD frequency: 0.00011  dbSNP: rs769393520
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV005809467 SCV006500260 uncertain significance not specified 2025-08-21 criteria provided, single submitter clinical testing The c.1188C>G (p.I396M) alteration is located in exon 4 (coding exon 4) of the DCLRE1B gene. This alteration results from a C to G substitution at nucleotide position 1188, causing the isoleucine (I) at amino acid position 396 to be replaced by a methionine (M). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.
Labcorp Genetics (formerly Invitae), Labcorp RCV001216754 SCV001388566 uncertain significance Hoyeraal-Hreidarsson syndrome; Autosomal recessive dyskeratosis congenita 2019-07-03 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated, but these predictions have not been confirmed by published functional studies and their clinical significance is uncertain. This sequence change replaces isoleucine with methionine at codon 396 of the DCLRE1B protein (p.Ile396Met). The isoleucine residue is weakly conserved and there is a small physicochemical difference between isoleucine and methionine. This variant is present in population databases (rs769393520, ExAC 0.03%). This variant has not been reported in the literature in individuals with DCLRE1B-related conditions.

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