ClinVar Miner

Submissions for variant NM_020806.5(GPHN):c.1300C>G (p.Gln434Glu)

dbSNP: rs770441465
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001928744 SCV002198551 uncertain significance Sulfite oxidase deficiency due to molybdenum cofactor deficiency type C 2025-02-27 criteria provided, single submitter clinical testing This sequence change replaces glutamine, which is neutral and polar, with glutamic acid, which is acidic and polar, at codon 434 of the GPHN protein (p.Gln434Glu). This variant is present in population databases (rs770441465, gnomAD 0.01%). This variant has not been reported in the literature in individuals affected with GPHN-related conditions. ClinVar contains an entry for this variant (Variation ID: 1423306). Invitae Evidence Modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) indicates that this missense variant is not expected to disrupt GPHN protein function with a negative predictive value of 80%. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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