ClinVar Miner

Submissions for variant NM_004239.4(TRIP11):c.5486C>T (p.Thr1829Ile)

gnomAD frequency: 0.00001  dbSNP: rs1256584749
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002015604 SCV002294638 uncertain significance Achondrogenesis, type IA 2025-02-03 criteria provided, single submitter clinical testing This sequence change replaces threonine with isoleucine at codon 1829 of the TRIP11 protein (p.Thr1829Ile). The threonine residue is moderately conserved and there is a moderate physicochemical difference between threonine and isoleucine. The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the gnomAD database. This variant has not been reported in the literature in individuals affected with TRIP11-related conditions. ClinVar contains an entry for this variant (Variation ID: 1500386). Invitae Evidence Modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) indicates that this missense variant is not expected to disrupt TRIP11 protein function with a negative predictive value of 80%. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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