ClinVar Miner

Submissions for variant NM_001267550.2(TTN):c.89947G>A (p.Val29983Met)

gnomAD frequency: 0.00009  dbSNP: rs397517746
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Total submissions: 9
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000040762 SCV007336393 uncertain significance not specified 2025-10-21 criteria provided, single submitter clinical testing Variant summary: TTN c.82243G>A (p.Val27415Met) results in a conservative amino acid change in the encoded protein sequence. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change. The variant allele was found at a frequency of 9.7e-05 in 248074 control chromosomes. This frequency is not significantly higher than estimated for disease-causing variants in TTN, allowing no conclusion about variant significance. c.82243G>A has been observed in individual(s) affected with Cardiomyopathy (Mazzarotto_2020, Mademont-Soler_2017, Pugh_2014). These report(s) do not provide unequivocal conclusions about association of the variant with Cardiomyopathy. To our knowledge, no experimental evidence demonstrating an impact on protein function has been reported. The following publications have been ascertained in the context of this evaluation (PMID: 28771489, 31983221, 24503780). ClinVar contains an entry for this variant (Variation ID: 47493). Based on the evidence outlined above, the variant was classified as uncertain significance.
Baylor Genetics RCV003147329 SCV003835296 uncertain significance Early-onset myopathy with fatal cardiomyopathy 2022-07-05 criteria provided, single submitter clinical testing
Revvity Omics, Revvity RCV000733290 SCV003819205 uncertain significance not provided 2019-03-27 criteria provided, single submitter clinical testing
Athena Diagnostics RCV000733290 SCV002770564 uncertain significance not provided 2021-07-16 criteria provided, single submitter clinical testing
Ambry Genetics RCV002362639 SCV002660825 likely benign Cardiovascular phenotype 2020-07-14 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Eurofins Ntd Llc (ga) RCV000733290 SCV000861337 uncertain significance not provided 2018-05-30 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000458878 SCV000542543 uncertain significance Dilated cardiomyopathy 1G; Autosomal recessive limb-girdle muscular dystrophy type 2J 2017-11-21 criteria provided, single submitter clinical testing
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000040762 SCV000064453 uncertain significance not specified 2012-01-03 criteria provided, single submitter clinical testing The Val27415Met variant (TTN) has not been previously reported nor previously id entified by our laboratory. Valine (Val) at position 27415 is highly conserved i n mammals and across evolutionarily distant species, increasing the likelihood t hat a change would not be tolerated. Computational predictions on the impact to the protein are mixed (AlignGVGD = benign, SIFT = pathogenic), though the accura cy of these tools is unknown. Additional information is needed to fully assess t he clinical significance of the Val27415Met variant.
Department of Clinical Pathology, School of Medicine, Fujita Health University RCV004558291 SCV004218312 likely benign EBV-positive nodal T- and NK-cell lymphoma no assertion criteria provided research

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